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XNAT 1.9.0 Release Notes

XNAT 1.9.0 represents a major effort to update foundational libraries and dependencies on which XNAT is built. The motivation for this effort is to move toward compliance with a SOC2 security audit. To that end, the XNAT team conducted its own codebase analysis against known CVEs, and discovered 133 addressable findings, which are classified as follows:

  • Critical Risk: 43

  • High Risk: 72

  • Medium / Low / Unknown: 18

Of these findings, here is how we adjudicated the actual risk to XNAT:

  • False Positive: 88

  • Mitigated: 39

  • Acceptable Risk: 6

However, even for those CVEs that we deemed a “False Positive”, in most cases we performed an update anyway – either to address another CVE, or simply to avoid the perception of an issue that false positives can create.

Our approach to addressing these fell into three categories:

  1. Updating the dependency library and the code that uses it

  2. Removing the library entirely for deprecated classes and elements

  3. Migrating dependencies out of XNAT core and into a plugin

The third approach was reserved for the XNAT Pipeline Engine, which has now been fully deprecated as of XNAT 1.9.0. Those institutions that still depend on pipelines for their processing execution can install the newly created Pipeline Engine Plugin. Since this plugin does contain documented instances of dependencies with known CVEs, please use with appropriate caution.

Related Documentation:

Other Updates

As part of the dependency update to the ehcache library, additional possibilities related to configuring and enabling distributed caching have been unlocked. However, this set of functionality is not expected to be fully fleshed out until a future release.

This release comes packaged with minor updates to the DicomEdit 6.7 library – dependency changes for compatibility as well as performance improvements and a couple of critical bugfixes in handling of the lists feature introduced in DE 6.6. Updates are listed in the DicomEdit 6.7 Release Notes.

In addition, a series of minor bugfixes and improvements were included in this release, including:

  • XNAT-8094: Improve project selection and deselection in custom form configuration UI

  • XNAT-8075: Fix display bug when sharing a subject with a large number of experiments

  • XNAT-8143: Allow for longer history objects in CT scan tables. Note that this has a known issue in implementation that we have published a manual hotfix for.

Known Plugin Compatibility Issues

Plugin / Version

Compatibility Notes

Planned Fix

Container Service 3.4.x – 3.5.0

Not supported in XNAT 1.9

Version 3.6.0

  • Updating hibernate dependency from 4.3.11 to 5.6.15

  • Migrating json columns to jsonb as necessary

DQR 2.0.x

Not supported in XNAT 1.9

Version 2.1.0

  • Updating hibernate validation and caching

  • Refactor paginated APIs

XSync 1.7.0

Not supported in XNAT 1.9

Version 1.8.0

  • Remove dependencies on axis, jetbrains annotations, and xnat-tasks.

  • Additional improvements annotated in Changelog

XNAT-OHIF 3.6.3

Not supported in XNAT 1.9

Version 3.7.0

Batch Launch 0.6.0

(warning) Partially Supported

Version 0.6.0 can be run with the Pipeline Engine Plugin installed

Version 0.7.0 has been released to run without the dependency on the Pipeline Engine

LDAP Auth 1.1.0

(tick) Supported

OpenID Auth 1.3.1

(tick) Supported

JupyterHub Integration 1.2.0

(tick) Supported

Plugin Deprecation Notice for ML & Datasets

Coinciding with this release, we are deciding to officially deprecate the ML and Datasets plugins. This was a difficult decision, considering that the XNAT ML and Datasets plugins were the result of more than a year’s intensive development that began with a demo challenge partnering with NVIDIA for RSNA 2019. However, support for AI and ML work in XNAT continues in other forms, via the JupyterHub Integration and the ability to connect the XNAT OHIF Viewer to AI-Assisted Annotation devices.

See: Full ML & Datasets Plugin Deprecation Announcement and Instructions

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